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CHARMM
CHARMM CHARMM (Chemistry at HARvard Macromolecular Mechanics) is a ... package associated with this force field. The CHARMM Development Project involves a network of developers ... at Harvard to develop and maintain the CHARMM program. Licenses for this software are available ... working in academia. The commercial version of CHARMM, called CHARMm (note the lowercase 'm') ...
http://en.wikipedia.org/wiki/CHARMM - 1k - Cached - Similar pages
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Force field (chemistry)
... Refinement) - widely used for proteins and DNA CHARMM - originally developed at Harvard, widely used for ... molecules and macromolecules CHARMm - commercial version of CHARMM, available through Accelrys CVFF - also broadly used ...
http://en.wikipedia.org/wiki/Force_field_(chemistry) - 4k - Cached - Similar pages
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Talk:Protein-protein docking
... parameters from molecular mechanics force fields (like CHARMM or AMBER). It is a matter of ... which I am retaining. the point about CHARMM and AMBER is that protein-protein dockers ...
http://en.wikipedia.org/wiki/Talk:Protein-protein_docking - 6k - Cached - Similar pages
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Molecular dynamics
... theory. Major software for MD simulations AMBER CHARMM CHARMm GROMACS GROMOS NAMD LAMMPS QUANTUM 3 ...
http://en.wikipedia.org/wiki/Molecular_dynamics - 16k - Cached - Similar pages
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Molecular dynamics (translated from Russian)
... the dynamics of biological molecules are: AMBER, CHARMM (and the commercial version CHARMm), GROMACS, GROMOS ...
http://ru.wikipedia.org/wiki/Молекулярная_динамика - 3k - Cached (Russian) - Wikipedia (Russian) - Similar pages
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Molecular dynamic method (translated from Japanese)
... AMBER (Assisted Model Building and Energy Refinement) CHARMM (Chemistry at HARvard Macromolecular Mechanics) 分子力学法においては分子力場から受ける力に従って原子の空間的な配置を移動させていくことで、よりエネルギーの低い配座に変化させていき、最終的には停留点として安定配座を求めることができる。 単純なソフトウェアでは初期に入力した立体配座に近い安定配座の1つが求まるのみであるが、より高機能なソフトウェアでは複数の初期配座を自動的に発生させて、複数の安定配座を求められるものもある。 ...
http://ja.wikipedia.org/wiki/分子力学法 - 14k - Cached (Japanese) - Wikipedia (Japanese) - Similar pages
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Molecular mechanics (translated from French)
... This list is not exhaustive: AMBER Atomsmith CHARMM forum GROMOS GROMACS NAMD TINKER References U ...
http://fr.wikipedia.org/wiki/Mécanique_moléculaire - 2k - Cached (French) - Wikipedia (French) - Similar pages
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Category:Molecular dynamics
... this category. Molecular dynamics A AMBER C CHARMM C cont. Car-Parrinello method F Force ...
http://en.wikipedia.org/wiki/Category:Molecular_dynamics - 0k - Cached - Similar pages
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Protein-protein docking
... fields developed by theoretical chemists, such as CHARMM or AMBER. Evolutionary history of amino-acid ...
http://en.wikipedia.org/wiki/Protein-protein_docking - 9k - Cached - Similar pages
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Category:Computational chemistry software
... AMPAC Amsterdam Density Functional C CADPAC CASTEP CHARMM CHEMKIN COLUMBUS COSILAB CRYSTAL D DALTON E ...
http://en.wikipedia.org/wiki/Category:Computational_chemistry_software - 1k - Cached - Similar pages
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